Deutsch Intern
    CU Fluorescence Imaging

    Equipment

    Leica TCS SP8 Laser-Scanning-Microscope

    Objectives

     2.5x Dry 10x Dry, 20x IMM, 63x Oil, 63x W

    Laser

     405 nm, 440 nm, 458 nm, 476 nm, 488 nm, 496 nm, 514 nm, 561 nm, 594 nm, 633 nm

    Light sources

    HXP Fluorescent lamp, transmitted light

    Fluorescence filter

    AOBS (Acousto Optical Beam Splitter)

    Detectors

    3 PMTs, 2 HyD

    Microscope stand

    inverse

    Special feature Extension for light sheet microscopy with 5x and 10x objective lens

    User model

    Independent use

    Costs

    15,- €/h internal (Employees of the RVZ)
    25,- €/h external

    Contact person

    Mike Friedrich
    Tel.: +49 931 31-80356 (office)
    E-Mail: mike.friedrich@uni-wuerzburg.de

    Location

    RVZ
    Building D15 / Room 00.109
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety level 1 laboratory

     

    Zeiss LSM 980 Airyscan 2

    Objectives

    2,5x Dry, 10x Dry, 20x IMM, 40x IMM, 63x Oil

    Laser

    405 nm, 445 nm, 488 nm, 514 nm, 543 nm, 561 nm, 593 nm, 639 nm

    Light sources

    HBO Fluorescent lamp, transmitted light

    Fluorescence filter

    Spectrale Detection

    Detectors

    Internal 2 PMT, 32-channel spectral detector; External 2 PMT, 2 SPAD

    Microscope stand

    inverse

    Special feature rapidFLIM-Modul für FLIM, FCS and anisotropie
    DFG device number INST 93/1022-1

    User model

    Independent use

    Costs

    30,- €/h internal (Employees of the RVZ)
    50,- €/h external

    Contact person

    Mike Friedrich
    Tel.: +49 931 31-80356 (office)
    E-Mail: mike.friedrich@uni-wuerzburg.de

    Location

    RVZ
    Building D15 / Room 00.107
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety level 1 laboratory

     

    Leica TCS SP8 MP Multiphoton Microscope

    Objectives

    Revolver: 10x Dry, 40x W; Schieber: 25x W, 25x IMM

    Laser

    488 nm, Ti:Sa 680 - 1080 nm, OPO 1000 - 1340 nm

    Light sources

    HXP Fluorescent lamp, transmitted light

    Fluorescence filter

    Descanned:  AOBS (Acousto Optical Beam Splitter), non-descanned: 4

    Detectors

    3 PMT, 2 HyD

    Microscope stand

    Upright
    Special feature Intravital microscopy

    User model

    Independent use

    Costs of use

    30,- €/h internal (Employees of the RVZ)
    50,- €/h external

    Contact persons

    Univ.-Prof. Dr. med. A. Zernecke-Madsen
    Tel.: +49 931 31-83171
    E-Mail: alma.zernecke@uni-wuerzburg.de

    Mike Friedrich
    Tel.: +49 931 31-80356 (office)
    E-Mail: mike.friedrich@uni-wuerzburg.de

    Location

    Building D16 / Room 2.202
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety level 1 laboratory

     

    5x Light-sheet Fluorescence Microscope

    Objectives

    5x Dry

    Laser

    488 nm, 532 nm, 560 nm, 640 nm, 730 nm,

    Light sources

    none

    Fluorescence filter

    5

    Detectors

    sCMOS Andor Neo

    User model

    Independent use

    Costs

    15,- €/h internal (Employees of the RVZ)
    25,- €/h external

    Contact person

    Mike Friedrich
    Tel.: +49 931 31-80356 (office)
    E-Mail: mike.friedrich@uni-wuerzburg.de

    Location

    RVZ
    Building D15 / Room 00.117
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety level 1 laboratory

     

    20x Light-sheet Fluorescence Microscope

    Objectives

    20x IMM

    Laser

    488 nm, 532 nm, 560 nm, 640 nm, 730 nm,

    Light sources

    none

    Fluorecence filter

    5

    Detectors

    sCMOS Andor Neo

    User model

    Independent use

    Costs of use

    15,- €/h internal (Employees of the RVZ)
    25,- €/h external

    Contact person

    Mike Friedrich
    Tel.: +49 931 31-80356 (Büro)
    E-Mail: mike.friedrich@uni-wuerzburg.de

    Location

    RVZ
    Building D15 / Room 00.117
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety level 1 laboratory

     

    Leica DMI 6000 Fluorescence Microscope

    Objectives

    10 x Dry, 20 x Dry, 40 x Dry, 63 x Gly, 100 x Oil

    Laser

     

    Light sources

    HBO Fluorescent lamp, transmitted light

    Fluorescence filter

    3

    Detectors

    sCMOS Leica

    Microscope stand

    inverse

    Special feature Live cell imaging with CO2 and temperature control

    User model

    Independent use

    Costs of use

    10,- €/h internal (Employees of the RVZ)
    15,- €/h external

    Contact person

    Mike Friedrich
    Tel.: +49 931 31-80356 (office)
    E-Mail: mike.friedrich@uni-wuerzburg.de

    Location

    RVZ
    Building D15 / Room 00.108
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety level 1 laboratory

     

    Zeiss Observer. Z1 dSTORM-Microscope

    Objectives

    10x Dry, 20x Dry, 40x Oil, 63x Oil, 63x W

    Laser

    532 nm, 640 nm

    Light source

    HBO Fluorescent lamp, transmitted light

    Fluorescence filter

    2

    Detectors

    EMCCD Andor iXon Ultra

    Microscope stand

    inverse

    User model

    Independent use

    Costs of use

    10,- €/h internal (Employees of the RVZ)
    15,- €/h external

    Location

    RVZ
    Building D15 / Room 00.108
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety level 1 laboratory

     

     PRIMO / Leica DMI 8 Fluorescence Microscope

    Objectives

    4 x Dry, 10 x Dry, 20 x Dry, 100 x Oil

    Laser

    405 nm 

    Light sources

    LED5 Fluorescence source, transmitted light

    Fluorescence filter

    4

    Detectors

    sCMOS Leica

    Microscope stand

    Inverse

    Special features

    2D and 3D photo-coating and microfabrication with Leonardo software from Alveole

    User model

    Independent use

    Costs of use

    10,- €/h für Internal (Employees of RVZ)
    15,- €/h für External

    Contact person

    Mike Friedrich
    Tel.: +49 931 31-80356 (Büro)
    E-Mail:
    mike.friedrich@uni-wuerzburg.de

    Location

    RVZ
    Building D15 / Room 00.104
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laboratory type

    Safety laevel 1 laboratory

     

    Nikon Eclipse Ti2-E Fluorescence Microscope

    Objectives 10x Dry, 20x Dry,
    (40x Long Distance Water), 60x Oil
    Laser  n/a
    Light sources LED Fluorescence lamp 390, 440, 475,
    510, 555, 575, 632, 740nm, transmitted light
    Fluorescence filter DAPI, FITS, TRITS, Cy5, Cy7; CFP, YFP,
    mCherry; TexasRED
    Detectors Hamamatsu Back Illuminated sCMOS
    Microscope stand inverse
    Special features Live cell imaging with CO2 and
    temperature control
    DFG Gerätenummer n/a
    User model Independent use
    Costs of use 15,- €/h internal (Employees of RVZ)
    25,- €/h external
    Contact person Mike Friedrich
    Tel.: +49 931 31-80356 (office)
    E-Mail: mike.friedrich@uni-wuerzburg.de
     
    Jürgen Pinnecker
    Tel.: +49 931 31-86800 (office)
    E-Mail: juergen.pinnecker@uni-wuerzburg.de
     
    Location RVZ
    Building D15 / Room 00.108
    Josef-Schneider-Str. 2
    97080 Würzburg
    Laboratory type Safety level 1 laboratory

     

     

    Picoquant FT300 Spectrometer

    Objectives

    n/a

    Laser

    450 nm, 485 nm, 560 nm, 640 nm, 730 nm (all max. 80 Mhz)

    Light sources

    Xenon Lamp

    Fluorescence filter

    Spectral detection using monochromators

    Detectors

    PMA Hybrid

    Special features

    Lifetime spectrometer with Xe lamp for recording
    fluorescence excitation and emission spectra, anisotropy

    User model

    Independent use

    Costs of use

    0,- €/h internal (Employees of RVZ)
    15,- €/h external

    Contact

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875 (office)
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Location

    RVZ
    Building D15 / Room 00.104
    Josef-Schneider-Str. 2
    97080 Würzburg

    Laborarory type

    Safety level 1 laboratory

    CUI-BEE / Workstation   (16 cores, 1024 Gb RAM)

    Processors

    2 x Intel Xeon Gold 6244 3.6GHz,(4.4GHz)
    (8 Cores)

    RAM

    1024 GB
    GPU NVIDIA Quadro RTX6000, 24GB

    Software/Licence

    Imaris, Huygens, Matlab, Fiji, Ilastik

    Special features

    5 users simultaneously, remote access only, login details available on request

    User model

    Independent use

    Costs of use

    0,- €/h internal/external

    Contact persons

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875 (office)
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Joachim Schenk
    Tel.: +49 931 31-87753
    E-Mail: joachim.schenk@uni-wuerzburg.de

     

     Workstation 1 / License   (24 cores, 256 GB RAM)

    Processors

    AMD EPYC 7443 24-Cores, 2.85 GHz

    RAM

    256 GB

    GPU

    Nvidia GeForce RTX 4060 Ti

    Software/Licence

    Imaris, Matlab, Fiji, Ilastik

    Special features

    Single-User, Remote-Zugriff possible, login details available on request

    User model

    Independent use

    Costs of use

    0,- €/h 

    Contact persons

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Joachim Schenk
    Tel.: +49 931 31-87753
    E-Mail: joachim.schenk@uni-wuerzburg.de

     

    Workstation 2 / License   (24 cores, 320 Gb)

    Processors

    AMD EPYC 7443 24-Cores, 2.85 GHz

    RAM

    320 GB

    GPU

    Nvidia GeForce RTX 4060 Ti

    Software / Licence

    Imaris, Matlab, Fiji, Ilastik

    Special features

    Single user, remote access possible, login details available on request

    usage model

    Application mode

    Costs of use

    0,- €/h

    Contact persons

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875 (Büro)
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Joachim Schenk
    Tel.: +49 931 31-87753
    E-Mail: joachim.schenk@uni-wuerzburg.de

     

    Software Huygens Deconvolution / License

     

    Software/License: 

     

    Huygens

    Special features:

     

    Single-User-Licence, only on CUI-BEE

    User model: 

     

    Independent use

    Costs of use: 

     

    0,- €/h

    Contact persons:

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Joachim Schenk
    Tel.: +49 931 31-87753
    E-Mail: joachim.schenk@uni-wuerzburg.de

     

    Software Imaris / License

    Software / License: 

     

      Bitplane Imaris

    Special feature:

     

     

     

    3x Single user license

    Name 

    # Licenses 

    Used for? 

    Deprecated (InPress) 

    -- 

    No longer used (deprecated by Imaris itself, only for very old versions) 

    FilamentTracer 

    Tracing of filamenteous structures, e.g. neurons or vessels 

    Imaris Cell 

    Segmentation of cellular structures which e.g. the nucleus and the cell membrane are stained 

    Imaris Coloc 

    Colocalization analysis 

    Imaris Lineage 

    To be used in combination with Imaris Track, can trac trace the lineage of dividing cells 

    Imaris Track 

    Tracking of objects 

    Imaris Vantage 

    To generate plots inside of Imaris, e.g. box plot of cell size distribution 

    Imaris XT 

    Ability to use extensions like direct data transfer to Fiji, python, Matlab or any of the (self-built) extensions. A list of XTensions can be found here: https://imaris.oxinst.com/open/  

    User model: 

     

      Independent use

    Costs of use: 

     

     

    0,- €/h 
    Contact persons:

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Joachim Schenk
    Tel.: +49 931 31-87753
    E-Mail: joachim.schenk@uni-wuerzburg.de

     

    Software Arivis / License

      Software/License:   Bitplane Imaris
      Special feature:    3x Single-User-License
     

    Name 

    # Licenses 

    Used for? 

     

    Deprecated (InPress) 

    -- 

    No longer used (deprecated by Imaris itself, only for very old versions) 

     

    FilamentTracer 

    Tracing of filamenteous structures, e.g. neurons or vessels 

     

    Imaris Cell 

    Segmentation of cellular structures which e.g. the nucleus and the cell membrane are stained 

     

    Imaris Coloc 

    Colocalization analysis 

     

    Imaris Lineage 

    To be used in combination with Imaris Track, can trac trace the lineage of dividing cells 

     

    Imaris Track 

    Tracking of objects 

     

    Imaris Vantage 

    To generate plots inside of Imaris, e.g. box plot of cell size distribution 

     

    Imaris XT 

    Ability to use extensions like direct data transfer to Fiji, python, Matlab or any of the (self-built) extensions. A list of XTensions can be found here: https://imaris.oxinst.com/open/  

      User model:   Independent use
      Costs of use:   0,- €
      Contact persons:  

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875 (office)
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Joachim Schenk
    Tel.: +49 931 31-87753
    E-Mail: joachim.schenk@uni-wuerzburg.de

    HeinzeHub (JupyterHub)

    Processor:                 

    AMD EPYC 7443P (24 Cores, 2.85GHz)

    RAM:

    320 GB

    GPU:                

     

    NVIDIA A4500 (20GB), NVIDIA A5000 (24GB)

    Special feature:

     

    Remote access only, login details available on request

    User model:  

     

    Independent use

    Costs of use:  

          

    0,- €/h

    Contact
    persons:

    Dr. Katherina Hemmen
    Tel.: +49 931 31- 89875
    E-Mail: katherina.hemmen@uni-wuerzburg.de

    Joachim Schenk
    Tel.: +49 931 31-87753
    E-Mail: joachim.schenk@uni-wuerzburg.de

     

    Full support during the booked microscopy or data analysis hour will incur an additional charge of € 25.00.